Genomics
Number of articles: 43
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Section: Genomics ; Topics: Genetics/Genomics
MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes
Néron, Bertrand;
Denise, Rémi;
Coluzzi, Charles;
Touchon, Marie;
Rocha, Eduardo P.C.;
Abby, Sophie S.
10.24072/pcjournal.250 - Peer Community Journal, Volume 3 (2023), article no. e28.
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Section: Genomics ; Topics: Genetics/Genomics, Evolution, Population biology
Performance and limitations of linkage-disequilibrium-based methods for inferring the genomic landscape of recombination and detecting hotspots: a simulation study
10.24072/pcjournal.254 - Peer Community Journal, Volume 3 (2023), article no. e27.
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Section: Genomics ; Topics: Genetics/Genomics, Microbiology
RAREFAN: A webservice to identify REPINs and RAYTs in bacterial genomes
10.24072/pcjournal.244 - Peer Community Journal, Volume 3 (2023), article no. e19.
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Section: Genomics ; Topics: Genetics/Genomics, Microbiology, Plant biology
Nucleosome patterns in four plant pathogenic fungi with contrasted genome structures
Clairet, Colin;
Lapalu, Nicolas;
Simon, Adeline;
Soyer, Jessica L.;
Viaud, Muriel;
Zehraoui, Enric;
Dalmais, Berengère;
Fudal, Isabelle;
Ponts, Nadia
10.24072/pcjournal.227 - Peer Community Journal, Volume 3 (2023), article no. e13.
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Section: Genomics ; Topics: Genetics/Genomics, Plant biology
Phenotypic and transcriptomic analyses reveal major differences between apple and pear scab nonhost resistance
Vergne, Emilie;
Chevreau, Elisabeth;
Ravon, Elisa;
Gaillard, Sylvain;
Pelletier, Sandra;
Bahut, Muriel;
Perchepied, Laure
10.24072/pcjournal.225 - Peer Community Journal, Volume 3 (2023), article no. e9.
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Section: Genomics ; Topics: Genetics/Genomics, Microbiology, Plant biology
Botrytis cinerea strains infecting grapevine and tomato display contrasted repertoires of accessory chromosomes, transposons and small RNAs
Simon, Adeline;
Mercier, Alex;
Gladieux, Pierre;
Poinssot, Benoît;
Walker, Anne-Sophie;
Viaud, Muriel
10.24072/pcjournal.211 - Peer Community Journal, Volume 2 (2022), article no. e83.
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Section: Genomics ; Topics: Genetics/Genomics, Plant biology
Somatic mutation detection: a critical evaluation through simulations and reanalyses in oaks
10.24072/pcjournal.187 - Peer Community Journal, Volume 2 (2022), article no. e68.
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Section: Genomics ; Topics: Genetics/Genomics, Evolution
MATEdb, a data repository of high-quality metazoan transcriptome assemblies to accelerate phylogenomic studies
Fernández, Rosa;
Tonzo, Vanina;
Simón Guerrero, Carolina;
Lozano-Fernandez, Jesus;
Martínez-Redondo, Gemma I.;
Balart-García, Pau;
Aristide, Leandro;
Eleftheriadi, Klara;
Vargas-Chávez, Carlos
10.24072/pcjournal.177 - Peer Community Journal, Volume 2 (2022), article no. e58.
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Section: Genomics ; Topics: Genetics/Genomics
EukProt: A database of genome-scale predicted proteins across the diversity of eukaryotes
Richter, Daniel J.;
Berney, Cédric;
Strassert, Jürgen F. H.;
Poh, Yu-Ping;
Herman, Emily K.;
Muñoz-Gómez, Sergio A.;
Wideman, Jeremy G.;
Burki, Fabien;
de Vargas, Colomban
10.24072/pcjournal.173 - Peer Community Journal, Volume 2 (2022), article no. e56.
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Section: Genomics ; Topics: Genetics/Genomics
CulebrONT: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
Orjuela, Julie;
Comte, Aurore;
Ravel, Sébastien;
Charriat, Florian;
Vi, Tram;
Sabot, François ;
Cunnac, Sébastien
10.24072/pcjournal.153 - Peer Community Journal, Volume 2 (2022), article no. e46.
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