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Genomics

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  A deep dive into genome assemblies of non-vertebrate animals

  Guiglielmoni, Nadège; Rivera-Vicéns, Ramón; Koszul, Romain; Flot, Jean-François

  10.24072/pcjournal.128 - Peer Community Journal, Volume 2 (2022), article no. e29.

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  Chromosomal rearrangements with stable repertoires of genes and transposable elements in an invasive forest-pathogenic fungus

  Demené, Arthur; Laurent, Benoît; Cros-Arteil, Sandrine; Boury, Christophe; Dutech, Cyril

  10.24072/pcjournal.127 - Peer Community Journal, Volume 2 (2022), article no. e28.

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  Traces of transposable elements in genome dark matter co-opted by flowering gene regulation networks

  Baud, Agnès; Wan, Mariène; Nouaud, Danielle; Francillonne, Nicolas; Anxolabéhère, Dominique; Quesneville, Hadi

  10.24072/pcjournal.68 - Peer Community Journal, Volume 2 (2022), article no. e14.

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  Semi-artificial datasets as a resource for validation of bioinformatics pipelines for plant virus detection

  Tamisier, Lucie; Haegeman, Annelies; Foucart, Yoika; Fouillien, Nicolas; Al Rwahnih, Maher; Buzkan, Nihal; Candresse, Thierry; Chiumenti, Michela; De Jonghe, Kris; Lefebvre, Marie; Margaria, Paolo; Reynard, Jean Sébastien; Stevens, Kristian; Kutnjak, Denis; Massart, Sébastien

  10.24072/pcjournal.62 - Peer Community Journal, Volume 1 (2021), article no. e53.

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  Pipeline to detect the positional and directional relationship between transposable elements and adjacent genes in host genome

  Meguerditchian, Caroline; Ergun, Ayse; Decroocq, Veronique; Lefebvre, Marie; Bui, Quynh-Trang

  10.24072/pcjournal.57 - Peer Community Journal, Volume 1 (2021), article no. e48.

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  Gut microbial ecology of Xenopus tadpoles across life stages

  Scalvenzi, Thibault; Clavereau, Isabelle; Bourge, Mickaël; Pollet, Nicolas

  10.24072/pcjournal.53 - Peer Community Journal, Volume 1 (2021), article no. e41.

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  A rapid and simple method for assessing and representing genome sequence relatedness

  Briand, M; Bouzid, M; Hunault, G; Legeay, M; Fischer-Le Saux, M; Barret, M

  10.24072/pcjournal.37 - Peer Community Journal, Volume 1 (2021), article no. e24.

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  Fine-scale quantification of GC-biased gene conversion intensity in mammals

  Galtier, Nicolas

  10.24072/pcjournal.22 - Peer Community Journal, Volume 1 (2021), article no. e17.

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  Evidence for shared ancestry between Actinobacteria and Firmicutes bacteriophages

  Koert, Matthew; López-Pérez, Júlia; Mattson, Courtney; Caruso, Steven; Erill, Ivan

  10.24072/pcjournal.25 - Peer Community Journal, Volume 1 (2021), article no. e16.

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  Genetic mapping of sex and self-incompatibility determinants in the androdioecious plant Phillyrea angustifolia

  Carré, Amélie; Gallina, Sophie; Santoni, Sylvain; Vernet, Philippe; Godé, Cécile; Castric, Vincent; Saumitou-Laprade, Pierre

  10.24072/pcjournal.23 - Peer Community Journal, Volume 1 (2021), article no. e15.