Genomics
Number of articles: 65
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Section: Genomics ; Topics: Genetics/genomics, Biophysics and computational biology, Systems biology
NetSyn: prokaryotic genomic context exploration of protein families
Stam, Mark;
Langlois, Jordan;
Chevalier, Céline;
Mainguy, Jean;
Reboul, Guillaume;
Bastard, Karine;
Médigue, Claudine;
Vallenet, David
10.24072/pcjournal.805 - Peer Community Journal, Volume 6 (2026), article no. e101
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Section: Genomics ; Topics: Genetics/genomics, Agricultural sciences, Biophysics and computational biology
Adopting graph-based pangenomics for agronomy and biodiversity studies: current resources and challenges
Bocs, Stéphanie;
Carrette, Camille;
Confais, Johann;
Dubois, Siegfried;
Duvaux, Ludovic;
Klopp, Christophe;
Lapalu, Nicolas;
Lasserre-Zuber, Pauline;
Legeai, Fabrice;
Lemaitre, Claire;
Linard, Benjamin;
Marthe, Nina;
Pierre, Baptiste;
Sarah, Gautier;
Sabot, François;
Tranchant-Dubreuil, Christine;
Zytnicki, Matthias
10.24072/pcjournal.781 - Peer Community Journal, Volume 6 (2026), article no. e86
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Section: Genomics ; Topics: Genetics/genomics, Microbiology, Computer sciences
ViroSeek: a viral detection pipeline for second-generation sequencing
Berger, Audric;
Lefebvre, Margaux J.M.;
Dainat, Jacques;
Jiolle, Davy;
Moltini-Conclois, Isabelle;
Talignani, Loic;
Mastriani, Emilio;
Cornelie, Sylvie;
Berthet, Nicolas;
Paupy, Christophe
10.24072/pcjournal.767 - Peer Community Journal, Volume 6 (2026), article no. e82
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Section: Genomics ; Topics: Genetics/genomics, Evolution
Comparing DNA extraction methods for successful PacBio HiFi sequencing: a case study of the freshwater mussel Anodonta anatina (Bivalvia: Unionidae)
10.24072/pcjournal.733 - Peer Community Journal, Volume 6 (2026), article no. e57
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Section: Genomics ; Topics: Genetics/genomics ; Conference: JOBIM
rnaends: an R package to study exact RNA ends at nucleotide resolution
10.24072/pcjournal.724 - Peer Community Journal, Volume 6 (2026), article no. e49
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Section: Genomics ; Topics: Genetics/genomics, Environmental sciences
Two de novo transcriptome assemblies and functional annotations from juvenile cuttlefish (Sepia officinalis) under various metal and pCO2 exposure conditions
10.24072/pcjournal.703 - Peer Community Journal, Volume 6 (2026), article no. e28
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Section: Genomics ; Topics: Genetics/genomics ; Conference: JOBIM
Benchmarking circRNA Detection Tools from Long-Read Sequencing Using Data-Driven and Flexible Simulation Framework
Rusakovich, Anastasia;
Corre, Sebastien;
Cadieu, Edouard;
Fraboulet, Rose-Marie;
Le Bars, Victor;
Galibert, Marie-Dominique;
Derrien, Thomas;
Blum, Yuna
10.24072/pcjournal.699 - Peer Community Journal, Volume 6 (2026), article no. e27
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Section: Genomics ; Topics: Genetics/genomics
Genome of Trichoderma gamsii strain T035, a promising beneficial fungus in agriculture
10.24072/pcjournal.686 - Peer Community Journal, Volume 6 (2026), article no. e18
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Section: Genomics ; Topics: Genetics/genomics
The identification of the replicative helicase loader gene dciA within the Helicobacter pylori genome challenges current replication initiation models for this bacterium
10.24072/pcjournal.682 - Peer Community Journal, Volume 6 (2026), article no. e16
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Section: Genomics ; Topics: Genetics/genomics
In silico evidence suggests that the SARS-CoV-2 Spike protein may target coiled-coil regions of numerous cytoskeletal and cytoskeleton-associated proteins
10.24072/pcjournal.681 - Peer Community Journal, Volume 6 (2026), article no. e13
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