Genomics

Semi-artificial datasets as a resource for validation of bioinformatics pipelines for plant virus detection

Tamisier, Lucie; Haegeman, Annelies; Foucart, Yoika; Fouillien, Nicolas; Al Rwahnih, Maher; Buzkan, Nihal; Candresse, Thierry; Chiumenti, Michela; De Jonghe, Kris; Lefebvre, Marie; Margaria, Paolo; Reynard, Jean Sébastien; Stevens, Kristian; Kutnjak, Denis; Massart, Sébastien

10.24072/pcjournal.62 - Peer Community Journal, Volume 1 (2021), article no. e53.
Pipeline to detect the positional and directional relationship between transposable elements and adjacent genes in host genome

Meguerditchian, Caroline; Ergun, Ayse; Decroocq, Veronique; Lefebvre, Marie; Bui, Quynh-Trang

10.24072/pcjournal.57 - Peer Community Journal, Volume 1 (2021), article no. e48.
Gut microbial ecology of Xenopus tadpoles across life stages

Scalvenzi, Thibault; Clavereau, Isabelle; Bourge, Mickaël; Pollet, Nicolas

10.24072/pcjournal.53 - Peer Community Journal, Volume 1 (2021), article no. e41.
A rapid and simple method for assessing and representing genome sequence relatedness

Briand, M; Bouzid, M; Hunault, G; Legeay, M; Fischer-Le Saux, M; Barret, M

10.24072/pcjournal.37 - Peer Community Journal, Volume 1 (2021), article no. e24.
Fine-scale quantification of GC-biased gene conversion intensity in mammals

Galtier, Nicolas

10.24072/pcjournal.22 - Peer Community Journal, Volume 1 (2021), article no. e17.
Evidence for shared ancestry between Actinobacteria and Firmicutes bacteriophages

Koert, Matthew; López-Pérez, Júlia; Mattson, Courtney; Caruso, Steven; Erill, Ivan

10.24072/pcjournal.25 - Peer Community Journal, Volume 1 (2021), article no. e16.
Genetic mapping of sex and self-incompatibility determinants in the androdioecious plant Phillyrea angustifolia

Carré, Amélie; Gallina, Sophie; Santoni, Sylvain; Vernet, Philippe; Godé, Cécile; Castric, Vincent; Saumitou-Laprade, Pierre

10.24072/pcjournal.23 - Peer Community Journal, Volume 1 (2021), article no. e15.
A primer and discussion on DNA-based microbiome data and related bioinformatics analyses

Douglas, Gavin M.; Langille, Morgan G. I.

10.24072/pcjournal.2 - Peer Community Journal, Volume 1 (2021), article no. e5.