Microbiology
Section: Genomics
Number of articles: 11
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Section: Genomics ; Topics: Genetics/genomics, Microbiology, Computer sciences
ViroSeek: a viral detection pipeline for second-generation sequencing
Berger, Audric;
Lefebvre, Margaux J.M.;
Dainat, Jacques;
Jiolle, Davy;
Moltini-Conclois, Isabelle;
Talignani, Loic;
Mastriani, Emilio;
Cornelie, Sylvie;
Berthet, Nicolas;
Paupy, Christophe
10.24072/pcjournal.767 - Peer Community Journal, Volume 6 (2026), article no. e82
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Section: Genomics ; Topics: Genetics/genomics, Microbiology
A Comprehensive Resource for Exploring Antiphage Defense: DefenseFinder Webservice,Wiki and Databases
Tesson, Florian;
Planel, Rémi;
Egorov, Artyom A;
Georjon, Héloïse;
Vaysset, Hugo;
Brancotte, Bryan;
Néron, Bertrand;
Mordret, Ernest;
Atkinson, Gemma Catherine;
Bernheim, Aude;
Cury, Jean
10.24072/pcjournal.470 - Peer Community Journal, Volume 4 (2024), article no. e91
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Section: Genomics ; Topics: Genetics/genomics, Health sciences, Microbiology
COVFlow: phylodynamics analyses of viruses from selected SARS-CoV-2 genome sequences
Danesh, Gonché;
Boennec, Corentin;
Verdurme, Laura;
Roussel, Mathilde;
Trombert-Paolantoni, Sabine;
Visseaux, Benoit;
Haim-Boukobza, Stéphanie;
Alizon, Samuel
10.24072/pcjournal.333 - Peer Community Journal, Volume 3 (2023), article no. e101
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Section: Genomics ; Topics: Genetics/genomics, Microbiology
RAREFAN: A webservice to identify REPINs and RAYTs in bacterial genomes
10.24072/pcjournal.244 - Peer Community Journal, Volume 3 (2023), article no. e19
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Section: Genomics ; Topics: Genetics/genomics, Microbiology, Plant biology
Nucleosome patterns in four plant pathogenic fungi with contrasted genome structures
Clairet, Colin;
Lapalu, Nicolas;
Simon, Adeline;
Soyer, Jessica L.;
Viaud, Muriel;
Zehraoui, Enric;
Dalmais, Berengère;
Fudal, Isabelle;
Ponts, Nadia
10.24072/pcjournal.227 - Peer Community Journal, Volume 3 (2023), article no. e13
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Section: Genomics ; Topics: Genetics/genomics, Microbiology, Plant biology
Botrytis cinerea strains infecting grapevine and tomato display contrasted repertoires of accessory chromosomes, transposons and small RNAs
Simon, Adeline;
Mercier, Alex;
Gladieux, Pierre;
Poinssot, Benoît;
Walker, Anne-Sophie;
Viaud, Muriel
10.24072/pcjournal.211 - Peer Community Journal, Volume 2 (2022), article no. e83
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Section: Genomics ; Topics: Genetics/genomics, Plant biology, Microbiology
Semi-artificial datasets as a resource for validation of bioinformatics pipelines for plant virus detection
Tamisier, Lucie;
Haegeman, Annelies;
Foucart, Yoika;
Fouillien, Nicolas;
Al Rwahnih, Maher;
Buzkan, Nihal;
Candresse, Thierry;
Chiumenti, Michela;
De Jonghe, Kris;
Lefebvre, Marie;
Margaria, Paolo;
Reynard, Jean Sébastien;
Stevens, Kristian;
Kutnjak, Denis;
Massart, Sébastien
10.24072/pcjournal.62 - Peer Community Journal, Volume 1 (2021), article no. e53
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Section: Genomics ; Topics: Genetics/genomics, Microbiology, Ecology
Gut microbial ecology of Xenopus tadpoles across life stages
10.24072/pcjournal.53 - Peer Community Journal, Volume 1 (2021), article no. e41
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Section: Genomics ; Topics: Genetics/genomics, Microbiology
A rapid and simple method for assessing and representing genome sequence relatedness
10.24072/pcjournal.37 - Peer Community Journal, Volume 1 (2021), article no. e24
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Section: Genomics ; Topics: Genetics/genomics, Microbiology
Evidence for shared ancestry between Actinobacteria and Firmicutes bacteriophages
10.24072/pcjournal.25 - Peer Community Journal, Volume 1 (2021), article no. e16
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