Mathematical & Computational Biology
Topic: Genetics/Genomics
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Section: Mathematical & Computational Biology ; Topics: Biophysics and computational biology, Evolution, Genetics/Genomics
An approximate likelihood method reveals ancient gene flow between human, chimpanzee and gorilla
10.24072/pcjournal.359 - Peer Community Journal, Volume 4 (2024), article no. e3.
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Section: Mathematical & Computational Biology ; Topics: Genetics/Genomics, Applied mathematics
General encoding of canonical k-mers
10.24072/pcjournal.323 - Peer Community Journal, Volume 3 (2023), article no. e87.
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Section: Mathematical & Computational Biology ; Topics: Biophysics and computational biology, Genetics/Genomics, Health sciences
Cancer phylogenetic tree inference at scale from 1000s of single cell genomes
Salehi, Sohrab ; Dorri, Fatemeh ; Chern, Kevin ; Kabeer, Farhia
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Rusk, Nicole
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Funnell, Tyler
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Williams, Marc J.
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Lai, Daniel
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Andronescu, Mirela
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Campbell, Kieran R.
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McPherson, Andrew
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Aparicio, Samuel
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Roth, Andrew
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Shah, Sohrab P.
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Bouchard-Côté, Alexandre
10.24072/pcjournal.292 - Peer Community Journal, Volume 3 (2023), article no. e63.
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Section: Mathematical & Computational Biology ; Topics: Biophysics and computational biology, Genetics/Genomics, Population biology
Population genetics: coalescence rate and demographic parameters inference
10.24072/pcjournal.285 - Peer Community Journal, Volume 3 (2023), article no. e53.
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Section: Mathematical & Computational Biology ; Topics: Biophysics and computational biology, Genetics/Genomics
Marker and source-marker reprogramming of Most Permissive Boolean networks and ensembles with BoNesis
10.24072/pcjournal.255 - Peer Community Journal, Volume 3 (2023), article no. e30.
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Section: Mathematical & Computational Biology ; Topics: Biophysics and computational biology, Genetics/Genomics
HMMploidy: inference of ploidy levels from short-read sequencing data
Soraggi, Samuele
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Rhodes, Johanna
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Altinkaya, Isin
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Tarrant, Oliver
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Balloux, Francois
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Fisher, Matthew C
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Fumagalli, Matteo
10.24072/pcjournal.178 - Peer Community Journal, Volume 2 (2022), article no. e60.
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Section: Mathematical & Computational Biology ; Topics: Biophysics and computational biology, Genetics/Genomics, Evolution
An efficient algorithm for estimating population history from genetic data
10.24072/pcjournal.132 - Peer Community Journal, Volume 2 (2022), article no. e32.
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Section: Mathematical & Computational Biology ; Topics: Biophysics and computational biology, Health sciences, Genetics/Genomics
Estimating dates of origin and end of COVID-19 epidemics
10.24072/pcjournal.63 - Peer Community Journal, Volume 1 (2021), article no. e70.
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