Table of Contents

Number of articles: 50

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  Ecology

  Soil variation response is mediated by growth trajectories rather than functional traits in a widespread pioneer Neotropical tree

  Levionnois, Sébastien; Tysklind, Niklas; Nicolini, Eric; Ferry, Bruno; Troispoux, Valérie; Le Moguedec, Gilles; Morel, Hélène; Stahl, Clément; Coste, Sabrina; Caron, Henri; Heuret, Patrick

  10.24072/pcjournal.262 - Peer Community Journal, Volume 3 (2023), article no. e50.

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  Ecology

  Most diverse, most neglected: weevils (Coleoptera: Curculionoidea) are ubiquitous specialized brood-site pollinators of tropical flora

  Haran, Julien; Kergoat, Gael J.; de Medeiros, Bruno A. S.

  10.24072/pcjournal.279 - Peer Community Journal, Volume 3 (2023), article no. e49.

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  Ecology

  Symbiotic nutrient cycling enables the long-term survival of Aiptasia in the absence of heterotrophic food sources

  Rädecker, Nils; Meibom, Anders

  10.24072/pcjournal.281 - Peer Community Journal, Volume 3 (2023), article no. e48.

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  Evolutionary Biology

  Host-symbiont-gene phylogenetic reconciliation

  Menet, Hugo; Trung, Alexia Nguyen; Daubin, Vincent; Tannier, Eric

  10.24072/pcjournal.273 - Peer Community Journal, Volume 3 (2023), article no. e47.

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  Evolutionary Biology

  Co-obligate symbioses have repeatedly evolved across aphids, but partner identity and nutritional contributions vary across lineages

  Manzano-Marín, Alejandro; Coeur d’acier, Armelle; Clamens, Anne-Laure; Cruaud, Corinne; Barbe, Valérie; Jousselin, Emmanuelle

  10.24072/pcjournal.278 - Peer Community Journal, Volume 3 (2023), article no. e46.

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  Evolutionary Biology

  Domestication of different varieties in the cheese-making fungus Geotrichum candidum

  Bennetot, Bastien; Vernadet, Jean-Philippe; Perkins, Vincent; Hautefeuille, Sophie; Rodríguez de la Vega, Ricardo C.; O’Donnell, Samuel; Snirc, Alodie; Grondin, Cécile; Lessard, Marie-Hélène; Peron, Anne-Claire; Labrie, Steve; Landaud, Sophie; Giraud, Tatiana; Ropars, Jeanne

  10.24072/pcjournal.266 - Peer Community Journal, Volume 3 (2023), article no. e45.

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  Zoology

  Climate of origin influences how a herbivorous mite responds to drought-stressed host plants

  Migeon, Alain; Auger, Philippe; Fossati-Gaschignard, Odile; Hufbauer, Ruth A; Miranda, Maëva; Zriki, Ghais; Navajas, Maria

  10.24072/pcjournal.272 - Peer Community Journal, Volume 3 (2023), article no. e44.

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  Evolutionary Biology

  Durable resistance or efficient disease control? Adult Plant Resistance (APR) at the heart of the dilemma

  Rimbaud, Loup; Papaïx, Julien; Rey, Jean-François; Moury, Benoît; Barrett, Luke G.; Thrall, Peter H.

  10.24072/pcjournal.271 - Peer Community Journal, Volume 3 (2023), article no. e43.

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  Zoology

  Brood thermoregulation effectiveness is positively linked to the amount of brood but not to the number of bees in honeybee colonies

  Godeau, Ugoline; Pioz, Maryline; Martin, Olivier; Rüger, Charlotte; Crauser, Didier; Le Conte, Yves; Henry, Mickael; Alaux, Cédric

  10.24072/pcjournal.270 - Peer Community Journal, Volume 3 (2023), article no. e42.

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  Microbiology

  Genomic changes during the evolution of the Coxiella genus along the parasitism-mutualism continuum

  Santos-Garcia, Diego; Morel, Olivier; Henri, Hélène; El Filali, Adil; Buysse, Marie; Noël, Valérie; McCoy, Karen D.; Gottlieb, Yuval; Klasson, Lisa; Zenner, Lionel; Duron, Olivier; Vavre, Fabrice

  10.24072/pcjournal.269 - Peer Community Journal, Volume 3 (2023), article no. e41.

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  Evolutionary Biology

  The landscape of nucleotide diversity in Drosophila melanogaster is shaped by mutation rate variation

  Barroso, Gustavo V; Dutheil, Julien Y

  10.24072/pcjournal.267 - Peer Community Journal, Volume 3 (2023), article no. e40.

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  Infections

  Evolution within a given virulence phenotype (pathotype) is driven by changes in aggressiveness: a case study of French wheat leaf rust populations

  Fontyn, Cécilia; Meyer, Kevin JG; Boixel, Anne-Lise; Delestre, Ghislain; Piaget, Emma; Picard, Corentin; Suffert, Frédéric; Marcel, Thierry C; Goyeau, Henriette

  10.24072/pcjournal.264 - Peer Community Journal, Volume 3 (2023), article no. e39.

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  Ecology

  Feeding and growth variations affect δ13C and δ15N budgets during ontogeny in a lepidopteran larva

  Charberet, Samuel M.; Maria, Annick; Siaussat, David; Gounand, Isabelle; Mathieu, Jérôme

  10.24072/pcjournal.265 - Peer Community Journal, Volume 3 (2023), article no. e38.

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  Evolutionary Biology

  Primate sympatry shapes the evolution of their brain architecture

  Robira, Benjamin; Perez-Lamarque, Benoît

  10.24072/pcjournal.259 - Peer Community Journal, Volume 3 (2023), article no. e37.

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  Animal Science

  The use of pigs vocalisation structure to assess the quality of human-pig relationship

  Villain, Avelyne S; Guérin, Carole; Tallet, Céline

  10.24072/pcjournal.260 - Peer Community Journal, Volume 3 (2023), article no. e36.

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  Ecology

  Rapid literature mapping on the recent use of machine learning for wildlife imagery

  Nakagawa, Shinichi; Lagisz, Malgorzata; Francis, Roxane; Tam, Jessica; Li, Xun; Elphinstone, Andrew; Jordan, Neil R.; O'Brien, Justine K.; Pitcher, Benjamin J.; Van Sluys, Monique; Sowmya, Arcot; Kingsford, Richard T.

  10.24072/pcjournal.261 - Peer Community Journal, Volume 3 (2023), article no. e35.

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  Ecology

  Data stochasticity and model parametrisation impact the performance of species distribution models: insights from a simulation study

  Lambert, Charlotte; Virgili, Auriane

  10.24072/pcjournal.263 - Peer Community Journal, Volume 3 (2023), article no. e34.

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  Ecology

  Different approaches to processing environmental DNA samples in turbid waters have distinct effects for fish, bacterial and archaea communities

  Turba, Rachel; Thai, Glory H.; Jacobs, David K.

  10.24072/pcjournal.256 - Peer Community Journal, Volume 3 (2023), article no. e33.

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  Infections

  The helper strategy in vector-transmission of plant viruses

  Di Mattia, Jérémy; Zeddam, Jean-Louis; Uzest, Marilyne; Blanc, Stéphane

  10.24072/pcjournal.258 - Peer Community Journal, Volume 3 (2023), article no. e32.

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  Zoology

  Population genetics of Glossina fuscipes fuscipes from southern Chad

  Ravel, Sophie; Mahamat, Mahamat Hissène; Ségard, Adeline; Argilés-Herrero, Rafael; Bouyer, Jérémy; Rayaisse, Jean-Baptiste; Solano, Philippe; Guihini Mollo, Brahim; Pèka, Mallaye; Darnas, Justin; Belem, Adrien Marie Gaston; Yoni, Wilfrid; Noûs, Camille; De Meeûs, Thierry

  10.24072/pcjournal.257 - Peer Community Journal, Volume 3 (2023), article no. e31.

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  Mathematical & Computational Biology

  Marker and source-marker reprogramming of Most Permissive Boolean networks and ensembles with BoNesis

  Paulevé, Loïc

  10.24072/pcjournal.255 - Peer Community Journal, Volume 3 (2023), article no. e30.

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  Evolutionary Biology

  Extrinsic mortality and senescence: a guide for the perplexed

  de Vries, Charlotte; Galipaud, Matthias; Kokko, Hanna

  10.24072/pcjournal.253 - Peer Community Journal, Volume 3 (2023), article no. e29.

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  Genomics

  MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes

  Néron, Bertrand; Denise, Rémi; Coluzzi, Charles; Touchon, Marie; Rocha, Eduardo P.C.; Abby, Sophie S.

  10.24072/pcjournal.250 - Peer Community Journal, Volume 3 (2023), article no. e28.

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  Genomics

  Performance and limitations of linkage-disequilibrium-based methods for inferring the genomic landscape of recombination and detecting hotspots: a simulation study

  Raynaud, Marie; Gagnaire, Pierre-Alexandre; Galtier, Nicolas

  10.24072/pcjournal.254 - Peer Community Journal, Volume 3 (2023), article no. e27.

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  Ecology

  Best organic farming expansion scenarios for pest control: a modeling approach

  Delattre, Thomas; Memah, Mohamed-Mahmoud; Franck, Pierre; Valsesia, Pierre; Lavigne, Claire

  10.24072/pcjournal.251 - Peer Community Journal, Volume 3 (2023), article no. e26.

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  Microbiology

  Comparative genomics and transcriptomic response to root exudates of six rice root-associated Burkholderia sensu lato species

  Wallner, Adrian; Klonowska, Agnieszka; Guigard, Ludivine; King, Eoghan; Rimbault, Isabelle; Ngonkeu, Eddy; Nguyen, Phuong; Béna, Gilles; Moulin, Lionel

  10.24072/pcjournal.252 - Peer Community Journal, Volume 3 (2023), article no. e25.

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  Infections

  African army ants at the forefront of virome surveillance in a remote tropical forest

  Fritz, Matthieu; Reggiardo, Bérénice; Filloux, Denis; Claude, Lisa; Fernandez, Emmanuel; Mahé, Frédéric; Kraberger, Simona; Custer, Joy M.; Becquart, Pierre; Mebaley, Telstar Ndong; Kombila, Linda Bohou; Lenguiya, Léadisaelle H.; Boundenga, Larson; Mombo, Illich M.; Maganga, Gael D.; Niama, Fabien R.; Koumba, Jean-Sylvain; Ogliastro, Mylène; Yvon, Michel; Martin, Darren P.; Blanc, Stéphane; Varsani, Arvind; Leroy, Eric; Roumagnac, Philippe

  10.24072/pcjournal.249 - Peer Community Journal, Volume 3 (2023), article no. e24.

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  Ecology

  The role of climate change and niche shifts in divergent range dynamics of a sister-species pair

  Summers, Jeremy; Lukas, Dieter; Logan, Corina J; Chen, Nancy

  10.24072/pcjournal.248 - Peer Community Journal, Volume 3 (2023), article no. e23.

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  Evolutionary Biology

  Increased birth rank of homosexual males: disentangling the older brother effect and sexual antagonism hypothesis

  Raymond, Michel; Turek, Daniel; Durand, Valérie; Nila, Sarah; Suryobroto, Bambang; Vadez, Julien; Barthes, Julien; Apostolou, Menelaos; Crochet, Pierre-André

  10.24072/pcjournal.247 - Peer Community Journal, Volume 3 (2023), article no. e22.

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  Neuroscience

  Automatic approach-avoidance tendency toward physical activity, sedentary, and neutral stimuli as a function of age, explicit affective attitude, and intention to be active

  Farajzadeh, Ata; Goubran, Miriam; Beehler, Alexa; Cherkaoui, Noura; Morrison, Paula; de Chanaleilles, Margaux; Maltagliati, Silvio; Cheval, Boris; Miller, Matthew W.; Sheehy, Lisa; Bilodeau, Martin; Orsholits, Dan; Boisgontier, Matthieu P.

  10.24072/pcjournal.246 - Peer Community Journal, Volume 3 (2023), article no. e21.

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  Evolutionary Biology

  The genetic architecture of local adaptation in a cline

  Laroche, Fabien; Lenormand, Thomas

  10.24072/pcjournal.245 - Peer Community Journal, Volume 3 (2023), article no. e20.

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  Genomics

  RAREFAN: A webservice to identify REPINs and RAYTs in bacterial genomes

  Fortmann-Grote, Carsten; Irmer, Julia von; Bertels, Frederic

  10.24072/pcjournal.244 - Peer Community Journal, Volume 3 (2023), article no. e19.

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  Infections

  Three-way relationships between gut microbiota, helminth assemblages and bacterial infections in wild rodent populations

  Bouilloud, Marie; Galan, Maxime; Dubois, Adelaide; Diagne, Christophe; Marianneau, Philippe; Roche, Benjamin; Charbonnel, Nathalie

  10.24072/pcjournal.243 - Peer Community Journal, Volume 3 (2023), article no. e18.

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  Infections

  Whole blood transcriptome profiles of trypanotolerant and trypanosusceptible cattle highlight a differential modulation of metabolism and immune response during infection by Trypanosoma congolense

  Peylhard, Moana; Berthier, David; Dayo, Guiguigbaza-Kossigan; Chantal, Isabelle; Sylla, Souleymane; Nidelet, Sabine; Dubois, Emeric; Martin, Guillaume; Sempéré, Guilhem; Flori, Laurence; Thévenon, Sophie

  10.24072/pcjournal.239 - Peer Community Journal, Volume 3 (2023), article no. e17.

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  Evolutionary Biology

  Heterogeneities in infection outcomes across species: sex and tissue differences in virus susceptibility

  Roberts, Katherine E; Longdon, Ben

  10.24072/pcjournal.242 - Peer Community Journal, Volume 3 (2023), article no. e16.

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  Ecology

  Four decades of phenology in an alpine amphibian: trends, stasis, and climatic drivers

  Lenzi, Omar; Grossenbacher, Kurt; Zumbach, Silvia; Lüscher, Beatrice; Althaus, Sarah; Schmocker, Daniela; Recher, Helmut; Thoma, Marco; Ozgul, Arpat; Schmidt, Benedikt R.

  10.24072/pcjournal.240 - Peer Community Journal, Volume 3 (2023), article no. e15.

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  Evolutionary Biology

  The fate of recessive deleterious or overdominant mutations near mating-type loci under partial selfing

  Tezenas, Emilie; Giraud, Tatiana; Véber, Amandine; Billiard, Sylvain

  10.24072/pcjournal.238 - Peer Community Journal, Volume 3 (2023), article no. e14.

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  Genomics

  Nucleosome patterns in four plant pathogenic fungi with contrasted genome structures

  Clairet, Colin; Lapalu, Nicolas; Simon, Adeline; Soyer, Jessica L.; Viaud, Muriel; Zehraoui, Enric; Dalmais, Berengère; Fudal, Isabelle; Ponts, Nadia

  10.24072/pcjournal.227 - Peer Community Journal, Volume 3 (2023), article no. e13.

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  Ecology

  The contrasted impacts of grasshoppers on soil microbial activities in function of primary production and herbivore diet

  Ibanez, Sébastien; Foulquier, Arnaud; Brun, Charles; Colace, Marie-Pascale; Piton, Gabin; Bernard, Lionel; Gallet, Christiane; Clément, Jean-Christophe

  10.24072/pcjournal.229 - Peer Community Journal, Volume 3 (2023), article no. e12.

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  Evolutionary Biology

  Artisanal and farmer bread making practices differently shape fungal species community composition in French sourdoughs

  Michel, Elisa; Masson, Estelle; Bubbendorf, Sandrine; Lapicque, Léocadie; Nidelet, Thibault; Segond, Diego; Guézenec, Stéphane; Marlin, Thérèse; Devillers, Hugo; Rué, Olivier; Onno, Bernard; Legrand, Judith; Sicard, Delphine

  10.24072/pcjournal.237 - Peer Community Journal, Volume 3 (2023), article no. e11.

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  Archaeology

  Parchment Glutamine Index (PQI): A novel method to estimate glutamine deamidation levels in parchment collagen obtained from low-quality MALDI-TOF data

  Nair, Bharath; Palomo, Ismael Rodríguez; Markussen, Bo; Wiuf, Carsten; Fiddyment, Sarah; Collins, Matthew James

  10.24072/pcjournal.230 - Peer Community Journal, Volume 3 (2023), article no. e10.

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  Genomics

  Phenotypic and transcriptomic analyses reveal major differences between apple and pear scab nonhost resistance

  Vergne, Emilie; Chevreau, Elisabeth; Ravon, Elisa; Gaillard, Sylvain; Pelletier, Sandra; Bahut, Muriel; Perchepied, Laure

  10.24072/pcjournal.225 - Peer Community Journal, Volume 3 (2023), article no. e9.

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  Evolutionary Biology

  Conditions for maintaining and eroding pseudo-overdominance and its contribution to inbreeding depression

  Abu-Awad, Diala; Waller, Donald

  10.24072/pcjournal.224 - Peer Community Journal, Volume 3 (2023), article no. e8.

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  Ecology

  Deleterious effects of thermal and water stresses on life history and physiology: a case study on woodlouse

  Depeux, Charlotte; Branger, Angèle; Moulignier, Théo; Moreau, Jérôme; Lemaître, Jean-François; Dechaume-Moncharmont, François-Xavier; Laverre, Tiffany; Paulhac, Hélène; Gaillard, Jean-Michel; Beltran-Bech, Sophie

  10.24072/pcjournal.228 - Peer Community Journal, Volume 3 (2023), article no. e7.

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  Evolutionary Biology

  How does the mode of evolutionary divergence affect reproductive isolation?

  De Sanctis, Bianca; Schneemann, Hilde; Welch, John J.

  10.24072/pcjournal.226 - Peer Community Journal, Volume 3 (2023), article no. e6.

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  Paleontology

  Spatio-temporal diversity of dietary preferences and stress sensibilities of early and middle Miocene Rhinocerotidae from Eurasia: impact of climate changes

  Hullot, Manon; Merceron, Gildas; Antoine, Pierre-Olivier

  10.24072/pcjournal.222 - Peer Community Journal, Volume 3 (2023), article no. e5.

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  Ecology

  Ten simple rules for working with high resolution remote sensing data

  Mahood, Adam L.; Joseph, Maxwell B.; Spiers, Anna I.; Koontz, Michael J.; Ilangakoon, Nayani; Solvik, Kylen K.; Quarderer, Nathan; McGlinchy, Joe; Scholl, Victoria M.; St. Denis, Lise A.; Nagy, Chelsea; Braswell, Anna; Rossi, Matthew W.; Herwehe, Lauren; Wasser, Leah; Cattau, Megan E.; Iglesias, Virginia; Yao, Fangfang; Leyk, Stefan; Balch, Jennifer K.

  10.24072/pcjournal.223 - Peer Community Journal, Volume 3 (2023), article no. e4.

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  Ecotoxicology & Environmental Chemistry

  Chemical effects on ecological interactions within a model-experiment loop

  Lamonica, Dominique; Charles, Sandrine; Clément, Bernard; Lopes, Christelle

  10.24072/pcjournal.209 - Peer Community Journal, Volume 3 (2023), article no. e3.

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  Zoology

  Non-target effects of ten essential oils on the egg parasitoid Trichogramma evanescens

  van Oudenhove, Louise; Cazier, Aurélie; Fillaud, Marine; Lavoir, Anne-Violette; Fatnassi, Hicham; Perez, Guy; Calcagno, Vincent

  10.24072/pcjournal.212 - Peer Community Journal, Volume 3 (2023), article no. e2.

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  Archaeology

  Can growth in captivity alter the calcaneal microanatomy of a wild ungulate?

  Cottereau, Romain; Ortiz, Katia; Locatelli, Yann; Houssaye, Alexandra; Cucchi, Thomas

  10.24072/pcjournal.210 - Peer Community Journal, Volume 3 (2023), article no. e1.

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