Table of Contents
Number of articles: 122
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Section: Ecology ; Topics: Ecology, Population biology
Mark loss can strongly bias estimates of demographic rates in multi-state models: a case study with simulated and empirical datasets
Touzalin, Frédéric;
Petit, Eric J.;
Cam, Emmanuelle;
Stagier, Claire;
Teeling, Emma C.;
Puechmaille, Sébastien J.
10.24072/pcjournal.348 - Peer Community Journal, Volume 3 (2023), article no. e122.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
slendr: a framework for spatio-temporal population genomic simulations on geographic landscapes
10.24072/pcjournal.354 - Peer Community Journal, Volume 3 (2023), article no. e121.
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Section: Archaeology ; Topics: Archaeology
IUENNA – openIng the soUthErn jauNtal as a micro-regioN for future Archaeology: A «para-description»
10.24072/pcjournal.338 - Peer Community Journal, Volume 3 (2023), article no. e120.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
Phenotypic stasis with genetic divergence
Mallard, François;
Noble, Luke;
Guzella, Thiago;
Afonso, Bruno;
Baer, Charles F.;
Teotónio, Henrique
10.24072/pcjournal.349 - Peer Community Journal, Volume 3 (2023), article no. e119.
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Section: Evolutionary Biology ; Topics: Evolution, Population biology
Does sociality affect evolutionary speed?
10.24072/pcjournal.352 - Peer Community Journal, Volume 3 (2023), article no. e118.
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Section: Evolutionary Biology ; Topics: Evolution, Population biology
Individual differences in developmental trajectory leave a male polyphenic signature in bulb mite populations
10.24072/pcjournal.351 - Peer Community Journal, Volume 3 (2023), article no. e117.
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Section: Ecology ; Topics: Ecology, Population biology
Modeling Tick Populations: An Ecological Test Case for Gradient Boosted Trees
10.24072/pcjournal.353 - Peer Community Journal, Volume 3 (2023), article no. e116.
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Section: Ecology ; Topics: Ecology, Population biology
Consistent individual positions within roosts in Spix’s disc-winged bats
Giacomini, Giada;
Chaves-Ramírez, Silvia;
Hernández-Pinsón, H. Andrés;
Barrantes, José Pablo;
Chaverri, Gloriana
10.24072/pcjournal.350 - Peer Community Journal, Volume 3 (2023), article no. e115.
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Section: Evolutionary Biology ; Topics: Evolution, Population biology
Landscape connectivity alters the evolution of density-dependent dispersal during pushed range expansions
Dahirel, Maxime;
Bertin, Aline;
Calcagno, Vincent;
Duraj, Camille;
Fellous, Simon;
Groussier, Géraldine;
Lombaert, Eric;
Mailleret, Ludovic;
Marchand, Anaël;
Vercken, Elodie
10.24072/pcjournal.347 - Peer Community Journal, Volume 3 (2023), article no. e114.
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Section: Ecology ; Topics: Ecology, Population biology
Influence of mimicry on extinction risk in Aculeata: a theoretical approach
10.24072/pcjournal.342 - Peer Community Journal, Volume 3 (2023), article no. e113.
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Section: Paleontology ; Topics: Paleontology, Genetics/Genomics
PaleoProPhyler: a reproducible pipeline for phylogenetic inference using ancient proteins
10.24072/pcjournal.344 - Peer Community Journal, Volume 3 (2023), article no. e112.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
Colour polymorphism and conspicuousness do not increase speciation rates in Lacertids
10.24072/pcjournal.345 - Peer Community Journal, Volume 3 (2023), article no. e111.
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Section: Neuroscience ; Topics: Neuroscience
A meta-analysis of the effect of protein synthesis inhibitors on rodent fear conditioning
10.24072/pcjournal.339 - Peer Community Journal, Volume 3 (2023), article no. e110.
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Section: Zoology ; Topics: Biology of interactions, Population biology
Time-course of antipredator behavioral changes induced by the helminth Pomphorhynchus laevis in its intermediate host Gammarus pulex: the switch in manipulation according to parasite developmental stage differs between behaviors
10.24072/pcjournal.346 - Peer Community Journal, Volume 3 (2023), article no. e109.
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Section: Evolutionary Biology ; Topics: Evolution, Population biology
Transgenerational cues about local mate competition affect offspring sex ratios in the spider mite Tetranychus urticae
Duncan, Alison B.;
Marinosci, Cassandra;
Devaux, Céline;
Lefèvre, Sophie;
Magalhães, Sara;
Griffin, Joanne;
Valente, Adeline;
Ronce, Ophélie;
Olivieri, Isabelle
10.24072/pcjournal.343 - Peer Community Journal, Volume 3 (2023), article no. e108.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
Telomere length varies with sex, hatching rank and year of birth in the Little Owl, Athene noctua
10.24072/pcjournal.341 - Peer Community Journal, Volume 3 (2023), article no. e107.
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Section: Infections ; Topics: Biology of interactions, Microbiology, Genetics/Genomics
Longitudinal Survey of Astrovirus infection in different bat species in Zimbabwe: Evidence of high genetic Astrovirus diversity
Chidoti, Vimbiso; De Nys, Hélène;
Abdi, Malika;
Mashura, Getrude;
Pinarello, Valérie;
Chiweshe, Ngoni;
Matope, Gift;
Guerrini, Laure;
Pfukenyi, Davies;
Cappelle, Julien;
Mwandiringana, Ellen;
Missé, Dorothée;
Gori, Elizabeth;
Bourgarel, Mathieu;
Liégeois, Florian
10.24072/pcjournal.340 - Peer Community Journal, Volume 3 (2023), article no. e106.
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Section: Ecology ; Topics: Ecology, Biology of interactions ; Conference: Euring 2023
Assessing species interactions using integrated predator-prey models
10.24072/pcjournal.337 - Peer Community Journal, Volume 3 (2023), article no. e105.
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Section: Ecology ; Topics: Ecology, Microbiology, Environmental sciences
Identification of microbial exopolymer producers in sandy and muddy intertidal sediments by compound-specific isotope analysis
Hubas, Cédric;
Gaubert-Boussarie, Julie;
D’Hondt, An-Sofie;
Jesus, Bruno;
Lamy, Dominique;
Meleder, Vona;
Prins, Antoine;
Rosa, Philippe;
Stock, Willem;
Sabbe, Koen
10.24072/pcjournal.336 - Peer Community Journal, Volume 3 (2023), article no. e104.
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Section: Network Science ; Topics: Applied mathematics
Structify-Net: Random Graph generation with controlled size and customized structure
10.24072/pcjournal.335 - Peer Community Journal, Volume 3 (2023), article no. e103.
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Section: Infections ; Topics: Biology of interactions, Microbiology, Ecology
Influence of endosymbionts on the reproductive fitness of the tick Ornithodoros moubata
10.24072/pcjournal.334 - Peer Community Journal, Volume 3 (2023), article no. e102.
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Section: Genomics ; Topics: Genetics/Genomics, Health sciences, Microbiology
COVFlow: phylodynamics analyses of viruses from selected SARS-CoV-2 genome sequences
Danesh, Gonché;
Boennec, Corentin;
Verdurme, Laura;
Roussel, Mathilde;
Trombert-Paolantoni, Sabine;
Visseaux, Benoit;
Haim-Boukobza, Stéphanie;
Alizon, Samuel
10.24072/pcjournal.333 - Peer Community Journal, Volume 3 (2023), article no. e101.
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Section: Genomics ; Topics: Genetics/Genomics, Plant biology
SNP discovery by exome capture and resequencing in a pea genetic resource collection
Aubert, Grégoire;
Kreplak, Jonathan;
Leveugle, Magalie;
Duborjal, Hervé;
Klein, Anthony;
Boucherot, Karen;
Vieille, Emilie;
Chabert-Martinello, Marianne;
Cruaud, Corinne;
Bourion, Virginie;
Lejeune-Hénaut, Isabelle;
Pilet-Nayel, Marie-Laure;
Bouchenak-Khelladi, Yanis;
Francillonne, Nicolas;
Tayeh, Nadim;
Pichon, Jean-Philippe;
Rivière, Nathalie;
Burstin, Judith
10.24072/pcjournal.332 - Peer Community Journal, Volume 3 (2023), article no. e100.
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Section: Evolutionary Biology ; Topics: Evolution, Population biology
The evolutionary dynamics of plastic foraging and its ecological consequences: a resource-consumer model
10.24072/pcjournal.330 - Peer Community Journal, Volume 3 (2023), article no. e99.
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Section: Ecology ; Topics: Ecology, Environmental sciences
Integrating biodiversity assessments into local conservation planning: the importance of assessing suitable data sources
10.24072/pcjournal.331 - Peer Community Journal, Volume 3 (2023), article no. e98.
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Section: Microbiology ; Topics: Microbiology, Applied biological sciences
Comparison of metabarcoding taxonomic markers to describe fungal communities in fermented foods
Rué, Olivier;
Coton, Monika;
Dugat-Bony, Eric;
Howell, Kate;
Irlinger, Françoise;
Legras, Jean-Luc;
Loux, Valentin;
Michel, Elisa;
Mounier, Jérôme;
Neuvéglise, Cécile;
Sicard, Delphine
10.24072/pcjournal.321 - Peer Community Journal, Volume 3 (2023), article no. e97.
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Section: Infections ; Topics: Biology of interactions, Microbiology, Health sciences
Chikungunya intra-vector dynamics in Aedes albopictus from Lyon (France) upon exposure to a human viremia-like dose range reveals vector barrier’s permissiveness and supports local epidemic potential
Viginier, Barbara;
Cappuccio, Lucie;
Garnier, Céline;
Martin, Edwige;
Maisse, Carine;
Valiente Moro, Claire;
Minard, Guillaume;
Fontaine, Albin;
Lequime, Sébastian;
Ratinier, Maxime;
Arnaud, Frédérick;
Raquin, Vincent
10.24072/pcjournal.326 - Peer Community Journal, Volume 3 (2023), article no. e96.
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Section: Microbiology ; Topics: Microbiology, Biology of interactions, Plant biology
Transmission of synthetic seed bacterial communities to radish seedlings: impact on microbiota assembly and plant phenotype
Simonin, Marie;
Préveaux, Anne;
Marais, Coralie;
Garin, Tiffany;
Arnault, Gontran;
Sarniguet, Alain;
Barret, Matthieu
10.24072/pcjournal.329 - Peer Community Journal, Volume 3 (2023), article no. e95.
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Section: Archaeology ; Topics: Archaeology
Zooarchaeological investigation of the Hoabinhian exploitation of reptiles and amphibians in Thailand and Cambodia with a focus on the Yellow-headed Tortoise (Indotestudo elongata (Blyth, 1854))
Bochaton, Corentin;
Chantasri, Sirikanya;
Maneechote, Melada;
Claude, Julien;
Griggo, Christophe;
Naksri, Wilailuck;
Forestier, Hubert;
Sophady, Heng;
Auertrakulvit, Prasit;
Bowonsachoti, Jutinach;
Zeitoun, Valéry
10.24072/pcjournal.328 - Peer Community Journal, Volume 3 (2023), article no. e94.
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Section: Genomics ; Topics: Genetics/Genomics, Cell biology
Expression of cell-wall related genes is highly variable and correlates with sepal morphology
Hartasánchez, Diego A.;
Kiss, Annamaria;
Battu, Virginie;
Soraru, Charline;
Delgado-Vaquera, Abigail;
Massinon, Florian;
Brasó-Vives, Marina;
Mollier, Corentin;
Martin-Magniette, Marie-Laure;
Boudaoud, Arezki;
Monéger, Françoise
10.24072/pcjournal.327 - Peer Community Journal, Volume 3 (2023), article no. e93.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
How do monomorphic bacteria evolve? The Mycobacterium tuberculosis complex and the awkward population genetics of extreme clonality
10.24072/pcjournal.322 - Peer Community Journal, Volume 3 (2023), article no. e92.
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Section: Infections ; Topics: Biology of interactions, Microbiology, Ecology
A soft tick vector of Babesia sp. YLG in Yellow-legged gull (Larus michahellis) nests
10.24072/pcjournal.316 - Peer Community Journal, Volume 3 (2023), article no. e91.
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Section: Ecotoxicology & Environmental Chemistry ; Topics: Environmental sciences, Genetics/Genomics
DRomics, a workflow to exploit dose-response omics data in ecotoxicology
10.24072/pcjournal.325 - Peer Community Journal, Volume 3 (2023), article no. e90.
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Section: Animal Science ; Topics: Agricultural sciences, Applied biological sciences
Validation of a Radio frequency identification system for tracking location of laying hens in a quasi-commercial aviary system
10.24072/pcjournal.324 - Peer Community Journal, Volume 3 (2023), article no. e89.
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Section: Microbiology ; Topics: Microbiology, Ecology, Population biology
Comparative abundance and diversity of populations of the Pseudomonas syringae and Soft Rot Pectobacteriaceae species complexes throughout the Durance River catchment from its French Alps sources to its delta
Morris, C.E.;
Lacroix, C.;
Chandeysson, C.;
Guilbaud, C.;
Monteil, C.;
Piry, S.;
Rochelle Newall, E.;
Fiorini, S.;
Van Gijsegem, F.;
Barny, M.A.;
Berge, O.
10.24072/pcjournal.317 - Peer Community Journal, Volume 3 (2023), article no. e88.
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Section: Mathematical & Computational Biology ; Topics: Genetics/Genomics, Applied mathematics
General encoding of canonical k-mers
10.24072/pcjournal.323 - Peer Community Journal, Volume 3 (2023), article no. e87.
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Section: Animal Science ; Topics: Agricultural sciences, Applied biological sciences
Combining several indicators to assess the effectiveness of tailor-made health plans in pig farms
Levallois, Pierre;
Leblanc-Maridor, Mily;
Scollo, Annalisa;
Ferrari, Paolo;
Belloc, Catherine;
Fourichon, Christine
10.24072/pcjournal.318 - Peer Community Journal, Volume 3 (2023), article no. e86.
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Section: Ecology ; Topics: Ecology, Population biology
Implementing a rapid geographic range expansion - the role of behavior changes
Logan, Corina;
McCune, Kelsey;
LeGrande-Rolls, Christa;
Marfori, Zara;
Hubbard, Josephine;
Lukas, Dieter
10.24072/pcjournal.320 - Peer Community Journal, Volume 3 (2023), article no. e85.
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Section: Genomics ; Topics: Genetics/Genomics, Evolution, Population biology
The demographic history of the wild crop relative Brachypodium distachyon is shaped by distinct past and present ecological niches
Minadakis, Nikolaos;
Williams, Hefin;
Horvath, Robert;
Caković, Danka;
Stritt, Christoph;
Thieme, Michael;
Bourgeois, Yann;
Roulin, Anne C.
10.24072/pcjournal.319 - Peer Community Journal, Volume 3 (2023), article no. e84.
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Section: Registered Reports ; Topics: Health sciences
Life Thinning and Gaming Disorder: A Longitudinal Qualitative Registered Report
10.24072/pcjournal.313 - Peer Community Journal, Volume 3 (2023), article no. e83.
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Section: Ecology ; Topics: Ecology, Biology of interactions, Biophysics and computational biology
Provision of essential resources as a persistence strategy in food webs
10.24072/pcjournal.315 - Peer Community Journal, Volume 3 (2023), article no. e82.
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Section: Infections ; Topics: Biology of interactions, Ecology
The distribution, phenology, host range and pathogen prevalence of Ixodes ricinus in France: a systematic map and narrative review
Perez, Grégoire;
Bournez, Laure;
Boulanger, Nathalie;
Fite, Johanna;
Livoreil, Barbara;
McCoy, Karen D.;
Quillery, Elsa;
René-Martellet, Magalie;
Bonnet, Sarah I.
10.24072/pcjournal.291 - Peer Community Journal, Volume 3 (2023), article no. e81.
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Section: Archaeology ; Topics: Archaeology
Geometric morphometric analysis of projectile points from the Southwest United States
10.24072/pcjournal.312 - Peer Community Journal, Volume 3 (2023), article no. e80.
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Section: Genomics ; Topics: Genetics/Genomics
Efficient k-mer based curation of raw sequence data: application in Drosophila suzukii
10.24072/pcjournal.309 - Peer Community Journal, Volume 3 (2023), article no. e79.
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Section: Forest & Wood Sciences ; Topics: Plant biology, Biophysics and computational biology
Modelling the growth stress in tree branches: eccentric growth vs. reaction wood
Van Rooij, Arnoul; Badel, Eric;
Barczi, Jean-François;
Caraglio, Yves;
Almeras, Tancrede;
Gril, Joseph
10.24072/pcjournal.308 - Peer Community Journal, Volume 3 (2023), article no. e78.
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Section: Health & Movement Sciences ; Topics: Health sciences
Comparing habit-behaviour relationships for organised versus leisure time physical activity
Newman, Katerina; Forestier, Cyril; Cheval, Boris;
Zenko, Zachary;
de Chanaleilles, Margaux;
Gardner, Benjamin;
Rebar, Amanda L.
10.24072/pcjournal.311 - Peer Community Journal, Volume 3 (2023), article no. e77.
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Section: Infections ; Topics: Biology of interactions, Microbiology, Health sciences
A global Corynebacterium diphtheriae genomic framework sheds light on current diphtheria reemergence
Hennart, Mélanie;
Crestani, Chiara;
Bridel, Sébastien;
Armatys, Nathalie;
Brémont, Sylvie;
Carmi-Leroy, Annick;
Landier, Annie;
Passet, Virginie;
Fonteneau, Laure;
Vaux, Sophie;
Toubiana, Julie;
Badell, Edgar;
Brisse, Sylvain
10.24072/pcjournal.307 - Peer Community Journal, Volume 3 (2023), article no. e76.
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Section: Genomics ; Topics: Genetics/Genomics, Evolution
Genomic data suggest parallel dental vestigialization within the xenarthran radiation
Emerling, Christopher A;
Gibb, Gillian C;
Tilak, Marie-Ka;
Hughes, Jonathan J;
Kuch, Melanie;
Duggan, Ana T;
Poinar, Hendrik N;
Nachman, Michael W;
Delsuc, Frédéric
10.24072/pcjournal.303 - Peer Community Journal, Volume 3 (2023), article no. e75.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
Phylogeographic breaks and how to find them: An empirical attempt at separating vicariance from isolation by distance in a lizard with restricted dispersal
Rancilhac, Loïs;
Miralles, Aurélien;
Geniez, Philippe;
Mendez-Aranda, Daniel;
Beddek, Menad;
Brito, José Carlos;
Leblois, Raphaël;
Crochet, Pierre-André
10.24072/pcjournal.301 - Peer Community Journal, Volume 3 (2023), article no. e74.
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Section: Animal Science ; Topics: Applied biological sciences, Political sciences
Ensuring ethical animal welfare research: Are more ethics review committees the solution?
Nielsen, Birte L.;
Golledge, Huw D. R.;
Chou, Jen-Yun;
Camerlink, Irene;
Pongrácz, Péter;
Ceballos, Maria Camila;
Whittaker, Alexandra L.;
Olsson, I. Anna S.
10.24072/pcjournal.310 - Peer Community Journal, Volume 3 (2023), article no. e73.
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Section: Microbiology ; Topics: Microbiology, Genetics/Genomics, Population biology
Within-species variation in the gut microbiome of medaka (Oryzias latipes) is driven by the interaction of light intensity and genetic background
Evangelista, Charlotte;
Kamenova, Stefaniya;
Diaz Pauli, Beatriz;
Sandkjenn, Joakim;
Vøllestad, Leif Asbjørn;
Edeline, Eric;
Trosvik, Pål;
de Muinck, Eric Jacques
10.24072/pcjournal.306 - Peer Community Journal, Volume 3 (2023), article no. e72.
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Section: Evolutionary Biology ; Topics: Evolution, Biology of interactions, Population biology
Sensitive windows for within- and trans-generational plasticity of anti-predator defences
10.24072/pcjournal.304 - Peer Community Journal, Volume 3 (2023), article no. e71.
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Section: Ecology ; Topics: Ecology, Population biology
Behavioral flexibility is manipulable and it improves flexibility and innovativeness in a new context
Logan, Corina;
Lukas, Dieter;
Blaisdell, Aaron;
Johnson-Ulrich, Zoe;
MacPherson, Maggie;
Seitz, Benjamin;
Sevchik, August;
McCune, Kelsey
10.24072/pcjournal.284 - Peer Community Journal, Volume 3 (2023), article no. e70.
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Section: Ecology ; Topics: Ecology, Biology of interactions, Environmental sciences
Being a tree crop increases the odds of experiencing yield declines irrespective of pollinator dependence
10.24072/pcjournal.305 - Peer Community Journal, Volume 3 (2023), article no. e69.
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Section: Forest & Wood Sciences ; Topics: Plant biology, Ecology, Population biology
Pollen contamination and mating structure in maritime pine (Pinus pinaster Ait.) clonal seed orchards revealed by SNP markers
Bouffier, Laurent;
Debille, Sandrine;
Alazard, Pierre;
Raffin, Annie;
Pastuszka, Patrick;
Trontin, Jean-François
10.24072/pcjournal.302 - Peer Community Journal, Volume 3 (2023), article no. e68.
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Section: Animal Science ; Topics: Genetics/Genomics, Agricultural sciences
The big challenge for livestock genomics is to make sequence data pay
10.24072/pcjournal.300 - Peer Community Journal, Volume 3 (2023), article no. e67.
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Section: Ecology ; Topics: Ecology, Environmental sciences
Field margins as substitute habitat for the conservation of birds in agricultural wetlands
Mallet, Pierre;
Bechet, Arnaud;
Sirami, Clelia;
Mesleard, Francois;
Blanchon, Thomas;
Calatayud, Francois;
Dagonet, Thomas;
Gaget, Elie;
Leray, Carole;
Galewski, Thomas
10.24072/pcjournal.299 - Peer Community Journal, Volume 3 (2023), article no. e66.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
Balancing selection at a wing pattern locus is associated with major shifts in genome-wide patterns of diversity and gene flow
Rodríguez de Cara, María Ángeles; Jay, Paul;
Rougemont, Quentin;
Chouteau, Mathieu;
Whibley, Annabel;
Huber, Barbara;
Piron-Prunier, Florence;
Ramos, Renato Rogner;
Freitas, André V. L.;
Salazar, Camilo;
Silva-Brandão, Karina Lucas;
Torres, Tatiana Teixeira;
Joron, Mathieu
10.24072/pcjournal.298 - Peer Community Journal, Volume 3 (2023), article no. e65.
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Section: Genomics ; Topics: Genetics/Genomics
Near-chromosome level genome assembly of devil firefish, Pterois miles
Kitsoulis, Christos V.; Papadogiannis, Vasileios; Kristoffersen, Jon B.; Kaitetzidou, Elisavet; Sterioti, Aspasia; Tsigenopoulos, Costas S.; Manousaki, Tereza
10.24072/pcjournal.295 - Peer Community Journal, Volume 3 (2023), article no. e64.
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Section: Mathematical & Computational Biology ; Topics: Biophysics and computational biology, Genetics/Genomics, Health sciences
Cancer phylogenetic tree inference at scale from 1000s of single cell genomes
Salehi, Sohrab; Dorri, Fatemeh; Chern, Kevin; Kabeer, Farhia;
Rusk, Nicole;
Funnell, Tyler;
Williams, Marc J.;
Lai, Daniel;
Andronescu, Mirela;
Campbell, Kieran R.;
McPherson, Andrew;
Aparicio, Samuel;
Roth, Andrew;
Shah, Sohrab P.;
Bouchard-Côté, Alexandre
10.24072/pcjournal.292 - Peer Community Journal, Volume 3 (2023), article no. e63.
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Section: Paleontology ; Topics: Paleontology
A baenid turtle shell from the Mesaverde Formation (Campanian, Late Cretaceous) of Park County, Wyoming, USA
10.24072/pcjournal.297 - Peer Community Journal, Volume 3 (2023), article no. e62.
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Section: Neuroscience ; Topics: Neuroscience
Optimizing the Benefits of Mental Practice on Motor Acquisition and Consolidation with Moderate-Intensity Exercise
10.24072/pcjournal.296 - Peer Community Journal, Volume 3 (2023), article no. e61.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
Facultative parthenogenesis: a transient state in transitions between sex and obligate asexuality in stick insects?
10.24072/pcjournal.283 - Peer Community Journal, Volume 3 (2023), article no. e60.
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Section: Ecology ; Topics: Ecology, Population biology
Colonisation debt: when invasion history impacts current range expansion
10.24072/pcjournal.293 - Peer Community Journal, Volume 3 (2023), article no. e59.
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Section: Ecology ; Topics: Ecology, Environmental sciences
Conservation networks do not match the ecological requirements of amphibians
10.24072/pcjournal.290 - Peer Community Journal, Volume 3 (2023), article no. e58.
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Section: Zoology ; Topics: Population biology, Ecology
Life-history traits, pace of life and dispersal among and within five species of Trichogramma wasps: a comparative analysis
Guicharnaud, Chloé;
Groussier, Géraldine;
Beranger, Erwan;
Lamy, Laurent;
Vercken, Elodie;
Dahirel, Maxime
10.24072/pcjournal.294 - Peer Community Journal, Volume 3 (2023), article no. e57.
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Section: Ecology ; Topics: Ecology, Evolution, Population biology
Evolutionary determinants of reproductive seasonality: A theoretical approach
10.24072/pcjournal.286 - Peer Community Journal, Volume 3 (2023), article no. e56.
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Section: Archaeology ; Topics: Archaeology
SEAHORS: Spatial Exploration of ArcHaeological Objects in R Shiny
10.24072/pcjournal.289 - Peer Community Journal, Volume 3 (2023), article no. e55.
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Section: Infections ; Topics: Biology of interactions, Health sciences
Multiple hosts, multiple impacts: the role of vertebrate host diversity in shaping mosquito life history and pathogen transmission
10.24072/pcjournal.288 - Peer Community Journal, Volume 3 (2023), article no. e54.
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Section: Mathematical & Computational Biology ; Topics: Biophysics and computational biology, Genetics/Genomics, Population biology
Population genetics: coalescence rate and demographic parameters inference
10.24072/pcjournal.285 - Peer Community Journal, Volume 3 (2023), article no. e53.
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Section: Ecology ; Topics: Ecology, Biology of interactions
Effects of adaptive harvesting on fishing down processes and resilience changes in predator-prey and tritrophic systems
10.24072/pcjournal.268 - Peer Community Journal, Volume 3 (2023), article no. e52.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
A new and almost perfectly accurate approximation of the eigenvalue effective population size of a dioecious population: comparisons with other estimates and detailed proofs
10.24072/pcjournal.280 - Peer Community Journal, Volume 3 (2023), article no. e51.
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Section: Ecology ; Topics: Ecology, Plant biology
Soil variation response is mediated by growth trajectories rather than functional traits in a widespread pioneer Neotropical tree
Levionnois, Sébastien;
Tysklind, Niklas;
Nicolini, Eric;
Ferry, Bruno;
Troispoux, Valérie;
Le Moguedec, Gilles;
Morel, Hélène;
Stahl, Clément;
Coste, Sabrina;
Caron, Henri;
Heuret, Patrick
10.24072/pcjournal.262 - Peer Community Journal, Volume 3 (2023), article no. e50.
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Section: Ecology ; Topics: Ecology, Environmental sciences, Biology of interactions
Most diverse, most neglected: weevils (Coleoptera: Curculionoidea) are ubiquitous specialized brood-site pollinators of tropical flora
10.24072/pcjournal.279 - Peer Community Journal, Volume 3 (2023), article no. e49.
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Section: Ecology ; Topics: Ecology, Environmental sciences
Symbiotic nutrient cycling enables the long-term survival of Aiptasia in the absence of heterotrophic food sources
10.24072/pcjournal.281 - Peer Community Journal, Volume 3 (2023), article no. e48.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics
Host-symbiont-gene phylogenetic reconciliation
10.24072/pcjournal.273 - Peer Community Journal, Volume 3 (2023), article no. e47.
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Section: Evolutionary Biology ; Topics: Evolution, Biology of interactions
Co-obligate symbioses have repeatedly evolved across aphids, but partner identity and nutritional contributions vary across lineages
Manzano-Marín, Alejandro;
Coeur d’acier, Armelle;
Clamens, Anne-Laure;
Cruaud, Corinne;
Barbe, Valérie;
Jousselin, Emmanuelle
10.24072/pcjournal.278 - Peer Community Journal, Volume 3 (2023), article no. e46.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Applied biological sciences
Domestication of different varieties in the cheese-making fungus Geotrichum candidum
Bennetot, Bastien;
Vernadet, Jean-Philippe;
Perkins, Vincent;
Hautefeuille, Sophie;
Rodríguez de la Vega, Ricardo C.;
O’Donnell, Samuel;
Snirc, Alodie;
Grondin, Cécile;
Lessard, Marie-Hélène;
Peron, Anne-Claire;
Labrie, Steve;
Landaud, Sophie;
Giraud, Tatiana;
Ropars, Jeanne
10.24072/pcjournal.266 - Peer Community Journal, Volume 3 (2023), article no. e45.
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Section: Zoology ; Topics: Biology of interactions
Climate of origin influences how a herbivorous mite responds to drought-stressed host plants
Migeon, Alain;
Auger, Philippe;
Fossati-Gaschignard, Odile;
Hufbauer, Ruth A;
Miranda, Maëva;
Zriki, Ghais;
Navajas, Maria
10.24072/pcjournal.272 - Peer Community Journal, Volume 3 (2023), article no. e44.
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Section: Evolutionary Biology ; Topics: Evolution, Plant biology
Durable resistance or efficient disease control? Adult Plant Resistance (APR) at the heart of the dilemma
Rimbaud, Loup;
Papaïx, Julien;
Rey, Jean-François;
Moury, Benoît;
Barrett, Luke G.;
Thrall, Peter H.
10.24072/pcjournal.271 - Peer Community Journal, Volume 3 (2023), article no. e43.
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Section: Zoology ; Topics: Applied biological sciences, Population biology
Brood thermoregulation effectiveness is positively linked to the amount of brood but not to the number of bees in honeybee colonies
Godeau, Ugoline;
Pioz, Maryline;
Martin, Olivier;
Rüger, Charlotte;
Crauser, Didier;
Le Conte, Yves;
Henry, Mickael;
Alaux, Cédric
10.24072/pcjournal.270 - Peer Community Journal, Volume 3 (2023), article no. e42.
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Section: Microbiology ; Topics: Microbiology, Genetics/Genomics, Evolution
Genomic changes during the evolution of the Coxiella genus along the parasitism-mutualism continuum
Santos-Garcia, Diego;
Morel, Olivier;
Henri, Hélène;
El Filali, Adil;
Buysse, Marie;
Noël, Valérie;
McCoy, Karen D.;
Gottlieb, Yuval;
Klasson, Lisa;
Zenner, Lionel;
Duron, Olivier;
Vavre, Fabrice
10.24072/pcjournal.269 - Peer Community Journal, Volume 3 (2023), article no. e41.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
The landscape of nucleotide diversity in Drosophila melanogaster is shaped by mutation rate variation
10.24072/pcjournal.267 - Peer Community Journal, Volume 3 (2023), article no. e40.
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Section: Infections ; Topics: Biology of interactions, Evolution, Plant biology
Evolution within a given virulence phenotype (pathotype) is driven by changes in aggressiveness: a case study of French wheat leaf rust populations
Fontyn, Cécilia; Meyer, Kevin JG; Boixel, Anne-Lise;
Delestre, Ghislain;
Piaget, Emma;
Picard, Corentin;
Suffert, Frédéric;
Marcel, Thierry C;
Goyeau, Henriette
10.24072/pcjournal.264 - Peer Community Journal, Volume 3 (2023), article no. e39.
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Section: Ecology ; Topics: Ecology, Physiology
Feeding and growth variations affect δ13C and δ15N budgets during ontogeny in a lepidopteran larva
10.24072/pcjournal.265 - Peer Community Journal, Volume 3 (2023), article no. e38.
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Section: Evolutionary Biology ; Topics: Evolution, Neuroscience
Primate sympatry shapes the evolution of their brain architecture
10.24072/pcjournal.259 - Peer Community Journal, Volume 3 (2023), article no. e37.
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Section: Animal Science ; Topics: Agricultural sciences, Applied biological sciences
The use of pigs vocalisation structure to assess the quality of human-pig relationship
10.24072/pcjournal.260 - Peer Community Journal, Volume 3 (2023), article no. e36.
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Section: Ecology ; Topics: Ecology
Rapid literature mapping on the recent use of machine learning for wildlife imagery
Nakagawa, Shinichi;
Lagisz, Malgorzata;
Francis, Roxane;
Tam, Jessica;
Li, Xun;
Elphinstone, Andrew;
Jordan, Neil R.;
O'Brien, Justine K.;
Pitcher, Benjamin J.;
Van Sluys, Monique;
Sowmya, Arcot;
Kingsford, Richard T.
10.24072/pcjournal.261 - Peer Community Journal, Volume 3 (2023), article no. e35.
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Section: Ecology ; Topics: Ecology, Statistics
Data stochasticity and model parametrisation impact the performance of species distribution models: insights from a simulation study
10.24072/pcjournal.263 - Peer Community Journal, Volume 3 (2023), article no. e34.
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Section: Ecology ; Topics: Ecology, Genetics/Genomics
Different approaches to processing environmental DNA samples in turbid waters have distinct effects for fish, bacterial and archaea communities
10.24072/pcjournal.256 - Peer Community Journal, Volume 3 (2023), article no. e33.
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Section: Infections ; Topics: Biology of interactions, Microbiology, Plant biology
The helper strategy in vector-transmission of plant viruses
10.24072/pcjournal.258 - Peer Community Journal, Volume 3 (2023), article no. e32.
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Section: Zoology ; Topics: Genetics/Genomics, Population biology
Population genetics of Glossina fuscipes fuscipes from southern Chad
Ravel, Sophie;
Mahamat, Mahamat Hissène;
Ségard, Adeline;
Argilés-Herrero, Rafael;
Bouyer, Jérémy;
Rayaisse, Jean-Baptiste;
Solano, Philippe;
Guihini Mollo, Brahim;
Pèka, Mallaye;
Darnas, Justin;
Belem, Adrien Marie Gaston;
Yoni, Wilfrid;
Noûs, Camille;
De Meeûs, Thierry
10.24072/pcjournal.257 - Peer Community Journal, Volume 3 (2023), article no. e31.
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Section: Mathematical & Computational Biology ; Topics: Biophysics and computational biology, Genetics/Genomics
Marker and source-marker reprogramming of Most Permissive Boolean networks and ensembles with BoNesis
10.24072/pcjournal.255 - Peer Community Journal, Volume 3 (2023), article no. e30.
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Section: Evolutionary Biology ; Topics: Evolution, Population biology
Extrinsic mortality and senescence: a guide for the perplexed
10.24072/pcjournal.253 - Peer Community Journal, Volume 3 (2023), article no. e29.
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Section: Genomics ; Topics: Genetics/Genomics
MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes
Néron, Bertrand;
Denise, Rémi;
Coluzzi, Charles;
Touchon, Marie;
Rocha, Eduardo P.C.;
Abby, Sophie S.
10.24072/pcjournal.250 - Peer Community Journal, Volume 3 (2023), article no. e28.
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Section: Genomics ; Topics: Genetics/Genomics, Evolution, Population biology
Performance and limitations of linkage-disequilibrium-based methods for inferring the genomic landscape of recombination and detecting hotspots: a simulation study
10.24072/pcjournal.254 - Peer Community Journal, Volume 3 (2023), article no. e27.
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Section: Ecology ; Topics: Ecology, Agricultural sciences
Best organic farming expansion scenarios for pest control: a modeling approach
10.24072/pcjournal.251 - Peer Community Journal, Volume 3 (2023), article no. e26.
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Section: Microbiology ; Topics: Microbiology, Biology of interactions, Plant biology
Comparative genomics and transcriptomic response to root exudates of six rice root-associated Burkholderia sensu lato species
Wallner, Adrian; Klonowska, Agnieszka;
Guigard, Ludivine;
King, Eoghan;
Rimbault, Isabelle;
Ngonkeu, Eddy;
Nguyen, Phuong;
Béna, Gilles;
Moulin, Lionel
10.24072/pcjournal.252 - Peer Community Journal, Volume 3 (2023), article no. e25.
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Section: Infections ; Topics: Biology of interactions, Microbiology
African army ants at the forefront of virome surveillance in a remote tropical forest
Fritz, Matthieu;
Reggiardo, Bérénice;
Filloux, Denis;
Claude, Lisa;
Fernandez, Emmanuel;
Mahé, Frédéric;
Kraberger, Simona;
Custer, Joy M.;
Becquart, Pierre;
Mebaley, Telstar Ndong;
Kombila, Linda Bohou;
Lenguiya, Léadisaelle H.;
Boundenga, Larson;
Mombo, Illich M.;
Maganga, Gael D.;
Niama, Fabien R.;
Koumba, Jean-Sylvain;
Ogliastro, Mylène;
Yvon, Michel;
Martin, Darren P.;
Blanc, Stéphane;
Varsani, Arvind;
Leroy, Eric;
Roumagnac, Philippe
10.24072/pcjournal.249 - Peer Community Journal, Volume 3 (2023), article no. e24.
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Section: Ecology ; Topics: Ecology, Population biology, Environmental sciences
The role of climate change and niche shifts in divergent range dynamics of a sister-species pair
10.24072/pcjournal.248 - Peer Community Journal, Volume 3 (2023), article no. e23.
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Section: Evolutionary Biology ; Topics: Evolution, Population biology, Developmental biology
Increased birth rank of homosexual males: disentangling the older brother effect and sexual antagonism hypothesis
Raymond, Michel;
Turek, Daniel;
Durand, Valérie;
Nila, Sarah;
Suryobroto, Bambang;
Vadez, Julien;
Barthes, Julien;
Apostolou, Menelaos;
Crochet, Pierre-André
10.24072/pcjournal.247 - Peer Community Journal, Volume 3 (2023), article no. e22.
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Section: Neuroscience ; Topics: Neuroscience
Automatic approach-avoidance tendency toward physical activity, sedentary, and neutral stimuli as a function of age, explicit affective attitude, and intention to be active
Farajzadeh, Ata;
Goubran, Miriam;
Beehler, Alexa;
Cherkaoui, Noura;
Morrison, Paula;
de Chanaleilles, Margaux;
Maltagliati, Silvio;
Cheval, Boris;
Miller, Matthew W.;
Sheehy, Lisa;
Bilodeau, Martin;
Orsholits, Dan;
Boisgontier, Matthieu P.
10.24072/pcjournal.246 - Peer Community Journal, Volume 3 (2023), article no. e21.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
The genetic architecture of local adaptation in a cline
10.24072/pcjournal.245 - Peer Community Journal, Volume 3 (2023), article no. e20.
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Section: Genomics ; Topics: Genetics/Genomics, Microbiology
RAREFAN: A webservice to identify REPINs and RAYTs in bacterial genomes
10.24072/pcjournal.244 - Peer Community Journal, Volume 3 (2023), article no. e19.
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Section: Infections ; Topics: Biology of interactions, Microbiology
Three-way relationships between gut microbiota, helminth assemblages and bacterial infections in wild rodent populations
Bouilloud, Marie;
Galan, Maxime;
Dubois, Adelaide;
Diagne, Christophe;
Marianneau, Philippe;
Roche, Benjamin;
Charbonnel, Nathalie
10.24072/pcjournal.243 - Peer Community Journal, Volume 3 (2023), article no. e18.
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Section: Infections ; Topics: Biology of interactions, Microbiology
Whole blood transcriptome profiles of trypanotolerant and trypanosusceptible cattle highlight a differential modulation of metabolism and immune response during infection by Trypanosoma congolense
Peylhard, Moana;
Berthier, David;
Dayo, Guiguigbaza-Kossigan;
Chantal, Isabelle;
Sylla, Souleymane;
Nidelet, Sabine;
Dubois, Emeric;
Martin, Guillaume;
Sempéré, Guilhem;
Flori, Laurence;
Thévenon, Sophie
10.24072/pcjournal.239 - Peer Community Journal, Volume 3 (2023), article no. e17.
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Section: Evolutionary Biology ; Topics: Evolution, Microbiology
Heterogeneities in infection outcomes across species: sex and tissue differences in virus susceptibility
10.24072/pcjournal.242 - Peer Community Journal, Volume 3 (2023), article no. e16.
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Section: Ecology ; Topics: Ecology, Population biology, Environmental sciences
Four decades of phenology in an alpine amphibian: trends, stasis, and climatic drivers
Lenzi, Omar;
Grossenbacher, Kurt;
Zumbach, Silvia;
Lüscher, Beatrice;
Althaus, Sarah;
Schmocker, Daniela;
Recher, Helmut;
Thoma, Marco;
Ozgul, Arpat;
Schmidt, Benedikt R.
10.24072/pcjournal.240 - Peer Community Journal, Volume 3 (2023), article no. e15.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
The fate of recessive deleterious or overdominant mutations near mating-type loci under partial selfing
10.24072/pcjournal.238 - Peer Community Journal, Volume 3 (2023), article no. e14.
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Section: Genomics ; Topics: Genetics/Genomics, Microbiology, Plant biology
Nucleosome patterns in four plant pathogenic fungi with contrasted genome structures
Clairet, Colin;
Lapalu, Nicolas;
Simon, Adeline;
Soyer, Jessica L.;
Viaud, Muriel;
Zehraoui, Enric;
Dalmais, Berengère;
Fudal, Isabelle;
Ponts, Nadia
10.24072/pcjournal.227 - Peer Community Journal, Volume 3 (2023), article no. e13.
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Section: Ecology ; Topics: Ecology, Biology of interactions
The contrasted impacts of grasshoppers on soil microbial activities in function of primary production and herbivore diet
Ibanez, Sébastien;
Foulquier, Arnaud;
Brun, Charles;
Colace, Marie-Pascale;
Piton, Gabin;
Bernard, Lionel;
Gallet, Christiane;
Clément, Jean-Christophe
10.24072/pcjournal.229 - Peer Community Journal, Volume 3 (2023), article no. e12.
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Section: Evolutionary Biology ; Topics: Evolution, Applied biological sciences
Artisanal and farmer bread making practices differently shape fungal species community composition in French sourdoughs
Michel, Elisa;
Masson, Estelle;
Bubbendorf, Sandrine;
Lapicque, Léocadie;
Nidelet, Thibault;
Segond, Diego;
Guézenec, Stéphane;
Marlin, Thérèse;
Devillers, Hugo;
Rué, Olivier;
Onno, Bernard;
Legrand, Judith;
Sicard, Delphine
10.24072/pcjournal.237 - Peer Community Journal, Volume 3 (2023), article no. e11.
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Section: Archaeology ; Topics: Archaeology
Parchment Glutamine Index (PQI): A novel method to estimate glutamine deamidation levels in parchment collagen obtained from low-quality MALDI-TOF data
Nair, Bharath;
Palomo, Ismael Rodríguez;
Markussen, Bo;
Wiuf, Carsten;
Fiddyment, Sarah;
Collins, Matthew James
10.24072/pcjournal.230 - Peer Community Journal, Volume 3 (2023), article no. e10.
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Section: Genomics ; Topics: Genetics/Genomics, Plant biology
Phenotypic and transcriptomic analyses reveal major differences between apple and pear scab nonhost resistance
Vergne, Emilie;
Chevreau, Elisabeth;
Ravon, Elisa;
Gaillard, Sylvain;
Pelletier, Sandra;
Bahut, Muriel;
Perchepied, Laure
10.24072/pcjournal.225 - Peer Community Journal, Volume 3 (2023), article no. e9.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
Conditions for maintaining and eroding pseudo-overdominance and its contribution to inbreeding depression
10.24072/pcjournal.224 - Peer Community Journal, Volume 3 (2023), article no. e8.
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Section: Ecology ; Topics: Ecology, Population biology
Deleterious effects of thermal and water stresses on life history and physiology: a case study on woodlouse
Depeux, Charlotte;
Branger, Angèle;
Moulignier, Théo;
Moreau, Jérôme;
Lemaître, Jean-François;
Dechaume-Moncharmont, François-Xavier;
Laverre, Tiffany;
Paulhac, Hélène;
Gaillard, Jean-Michel;
Beltran-Bech, Sophie
10.24072/pcjournal.228 - Peer Community Journal, Volume 3 (2023), article no. e7.
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Section: Evolutionary Biology ; Topics: Evolution, Genetics/Genomics, Population biology
How does the mode of evolutionary divergence affect reproductive isolation?
10.24072/pcjournal.226 - Peer Community Journal, Volume 3 (2023), article no. e6.
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Section: Paleontology ; Topics: Paleontology
Spatio-temporal diversity of dietary preferences and stress sensibilities of early and middle Miocene Rhinocerotidae from Eurasia: impact of climate changes
10.24072/pcjournal.222 - Peer Community Journal, Volume 3 (2023), article no. e5.
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Section: Ecology ; Topics: Ecology, Applied biological sciences
Ten simple rules for working with high resolution remote sensing data
Mahood, Adam L.;
Joseph, Maxwell B.;
Spiers, Anna I.;
Koontz, Michael J.;
Ilangakoon, Nayani;
Solvik, Kylen K.;
Quarderer, Nathan;
McGlinchy, Joe;
Scholl, Victoria M.;
St. Denis, Lise A.;
Nagy, Chelsea;
Braswell, Anna;
Rossi, Matthew W.;
Herwehe, Lauren;
Wasser, Leah;
Cattau, Megan E.;
Iglesias, Virginia;
Yao, Fangfang;
Leyk, Stefan;
Balch, Jennifer K.
10.24072/pcjournal.223 - Peer Community Journal, Volume 3 (2023), article no. e4.
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Section: Ecotoxicology & Environmental Chemistry ; Topics: Environmental sciences, Chemistry
Chemical effects on ecological interactions within a model-experiment loop
10.24072/pcjournal.209 - Peer Community Journal, Volume 3 (2023), article no. e3.
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Section: Zoology ; Topics: Agricultural sciences, Applied biological sciences, Population biology
Non-target effects of ten essential oils on the egg parasitoid Trichogramma evanescens
van Oudenhove, Louise;
Cazier, Aurélie;
Fillaud, Marine;
Lavoir, Anne-Violette;
Fatnassi, Hicham;
Perez, Guy;
Calcagno, Vincent
10.24072/pcjournal.212 - Peer Community Journal, Volume 3 (2023), article no. e2.
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Section: Archaeology ; Topics: Archaeology
Can growth in captivity alter the calcaneal microanatomy of a wild ungulate?
10.24072/pcjournal.210 - Peer Community Journal, Volume 3 (2023), article no. e1.
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